BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B08SP1|AL429522
(826 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1597 0.0
>3x_Contig1770
Length = 29267
Score = 1597 bits (799), Expect = 0.0
Identities = 812/823 (98%)
Strand = Plus / Plus
Query: 4 cagcgcagaccatgttttaccagcgtatcatgatgtggttcaagagagtttttttctact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20943 cagcgcagaccatgttttaccagcgtatcatgatgtggttcaagagagtttttttctact 21002
Query: 64 tcttctatttgcttctcaacaacgtaccgaaaamagtatgggatatcttacacgttgtta 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21003 tcttctatttgcttctcaacaacgtaccgaaaacagtatgggatatcttacacgttgtta 21062
Query: 124 ctgatatttacatgttttggtggagaaagtttatggataaagtacggcctaggtctcgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21063 ctgatatttacatgttttggtggagaaagtttatggataaagtacggcctaggtctcgga 21122
Query: 184 ctatgtacagggaagctgttgctgggctatacgggtgtgatgactatgaggaatggtatg 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 21123 ctatgtacagggaagctgttgctgggttatacgggtgtgatgactatgaggaatggtatg 21182
Query: 244 agaaggccagcttggtggacgagttgactggtgtagatmtttggagamgtaatttctttt 303
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 21183 agaaggccagcttggtggacgagttgactggtgtagatctttggagacgtaatttctttt 21242
Query: 304 cgaaaagattcgattttgaagctgtattggaacagtatgcagcattgatggaatcgttgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21243 cgaaaagattcgattttgaagctgtattggaacagtatgcagcattgatggaatcgttgg 21302
Query: 364 aagaagawgactttgagamtgtwaagtcgaggttcactaawacggggcccacgatgttaa 423
||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 21303 aagaagatgactttgagactgttaagtcgaggttcactaatacggggcccacgatgttaa 21362
Query: 424 ggaactttgcaggtatcgttgataaacggctattcacgaaatcwttggtcggaactaaat 483
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21363 ggaactttgcaggtatcgttgataaacggctattcacgaaatctttggtcggaactaaat 21422
Query: 484 tgcttatagagcaatatttggataaagtggtggatacgttatatctactaacggcgcatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21423 tgcttatagagcaatatttggataaagtggtggatacgttatatctactaacggcgcatc 21482
Query: 544 cggaagtggttcaaaggactttttttcaacggtgcaagcwttctttaggtgcgactgcmc 603
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 21483 cggaagtggttcaaaggactttttttcaacggtgcaagctttctttaggtgcgactgcac 21542
Query: 604 ttgcgttgcaaggtgggtcacttttcggattattccacctcggcgtattgaagggattgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21543 ttgcgttgcaaggtgggtcacttttcggattattccacctcggcgtattgaagggattgt 21602
Query: 664 tggataggaatcttttacccaatatcatcaacgggacctcgatgggcgcatgcgtcgcaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21603 tggataggaatcttttacccaatatcatcaacgggacctcgatgggcgcatgcgtcgcaa 21662
Query: 724 gcatggcatgttgtctcagcgatggagagttggaagatctattgaccggaaacagacttg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21663 gcatggcatgttgtctcagcgatggagagttggaagatctattgaccggaaacagacttg 21722
Query: 784 tatctacaattaaacgcgatacagcgttaatgaaagaatgtgg 826
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21723 tatctacaattaaacgcgatacagcgttaatgaaagaatgtgg 21765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4847
Number of Sequences: 1807
Number of extensions: 4847
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 826
length of database: 10,358,551
effective HSP length: 16
effective length of query: 810
effective length of database: 10,329,639
effective search space: 8367007590
effective search space used: 8367007590
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)